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1

Fractionation iCLIP detects persistent SR protein binding to conserved, retained introns in chromatin, nucleoplasm and cytoplasm

Brugiolo, Mattia, Botti, Valentina, Liu, Na, Müller-McNicoll, Michaela, Neugebauer, Karla M.

Journal:

Nucleic Acids Research

Year:

2017

Language:

english

File:

PDF, 3.25 MB

english, 2017

2

SR proteins are autoantigens in patients with systemic lupus erythematosus: Importance of phosphoepitopes

Karla M. Neugebauer, Joan T. Merrill, Mark H. Wener, Robert G. Lahita, Mark B. Roth

Journal:

Arthritis & Rheumatism

Year:

2000

Language:

english

File:

PDF, 375 KB

english, 2000

3

The Cajal body: a meeting place for spliceosomal snRNPs in the nuclear maze

David Staněk, Karla M. Neugebauer

Journal:

Year:

2006

Language:

english

File:

PDF, 276 KB

english, 2006

4

Identification of four functional NR3B isoforms in developing white matter reveals unexpected diversity among glutamate receptors

António M. de Jesus Domingues, Karla M. Neugebauer, Robert Fern

Journal:

Journal of Neurochemistry

Year:

2011

Language:

english

File:

PDF, 1.05 MB

english, 2011

5

El Sur también existe: processing RNA in the Argentine Patagonia. Meetings on ‘Cell Biology, Signaling and Alternative Splicing’ and ‘Gene Expression and RNA Processing’

Martinez, Javier, Neugebauer, Karla M.

Journal:

Year:

2008

Language:

english

File:

PDF, 811 KB

english, 2008

6

Coilin-dependent snRNP assembly is essential for zebrafish embryogenesis

Strzelecka, Magdalena, Trowitzsch, Simon, Weber, Gert, Lührmann, Reinhard, Oates, Andrew C, Neugebauer, Karla M

Journal:

Nature Structural and Molecular Biology

Year:

2010

Language:

english

File:

PDF, 840 KB

english, 2010

7

Global analysis reveals SRp20- and SRp75-specific mRNPs in cycling and neural cells

Änkö, Minna-Liisa, Morales, Lucia, Henry, Ian, Beyer, Andreas, Neugebauer, Karla M

Journal:

Nature Structural and Molecular Biology

Year:

2010

Language:

english

File:

PDF, 1.22 MB

english, 2010

8

Please hold—the next available exon will be right with you

Neugebauer, Karla M

Journal:

Nature Structural and Molecular Biology

Year:

2006

Language:

english

File:

PDF, 165 KB

english, 2006

9

Cotranscriptional coupling of splicing factor recruitment and precursor messenger RNA splicing in mammalian cells

Listerman, Imke, Sapra, Aparna K, Neugebauer, Karla M

Journal:

Nature Structural and Molecular Biology

Year:

2006

Language:

english

File:

PDF, 277 KB

english, 2006

10

The RNA-binding landscapes of two SR proteins reveal unique functions and binding to diverse RNA classes

Minna-Liisa Änkö, Michaela Müller-McNicoll, Holger Brandl, Tomaz Curk, Crtomir Gorup, Ian Henry, Jernej Ule, Karla M Neugebauer

Journal:

Year:

2012

Language:

english

File:

PDF, 1.12 MB

english, 2012

11

Das Verhalten des Leber- und Muskelglykogens nach Adrenalin, Noradrenalin und Novadral

Karl Credner, Karla Krüger, Kurt Neugebauer

Journal:

Journal of Molecular Medicine

Year:

1953

Language:

german

File:

PDF, 348 KB

german, 1953

12

The nucleus and gene expression: the center of the cyclone

Asifa Akhtar, Karla Neugebauer

Journal:

Current Opinion in Cell Biology

Year:

2012

Language:

english

File:

PDF, 156 KB

english, 2012

13

Pause locally, splice globally

Fernando Carrillo Oesterreich, Nicole Bieberstein, Karla M. Neugebauer

Journal:

Trends in Cell Biology

Year:

2011

Language:

english

File:

PDF, 566 KB

english, 2011

14

RNA–protein interactions in vivo: global gets specific

Minna-Liisa Änkö, Karla M. Neugebauer

Journal:

Trends in Biochemical Sciences

Year:

2012

Language:

english

File:

PDF, 567 KB

english, 2012

15

Structural basis for dimethylarginine recognition by the Tudor domains of human SMN and SPF30 proteins

Tripsianes, Konstantinos, Madl, Tobias, Machyna, Martin, Fessas, Dimitrios, Englbrecht, Clemens, Fischer, Utz, Neugebauer, Karla M, Sattler, Michael

Journal:

Nature Structural and Molecular Biology

Year:

2011

Language:

english

File:

PDF, 1.34 MB

english, 2011

16

Cotranscriptional Spliceosome Assembly Occurs in a Stepwise Fashion and Requires the Cap Binding Complex

Janina Görnemann, Kimberly M. Kotovic, Katja Hujer, Karla M. Neugebauer

Journal:

Year:

2005

Language:

english

File:

PDF, 629 KB

english, 2005

17

SR Protein Family Members Display Diverse Activities in the Formation of Nascent and Mature mRNPs In Vivo

Aparna K. Sapra, Minna-Liisa Änkö, Inna Grishina, Mike Lorenz, Marta Pabis, Ina Poser, Jarod Rollins, Eva-Maria Weiland, Karla M. Neugebauer

Journal:

Year:

2009

Language:

english

File:

PDF, 1.64 MB

english, 2009

18

Long Noncoding RNAs Add Another Layer to Pre-mRNA Splicing Regulation

Minna-Liisa Änkö, Karla M. Neugebauer

Journal:

Year:

2010

Language:

english

File:

PDF, 174 KB

english, 2010

19

Global Analysis of Nascent RNA Reveals Transcriptional Pausing in Terminal Exons

Fernando Carrillo Oesterreich, Stephan Preibisch, Karla M. Neugebauer

Journal:

Year:

2010

Language:

english

File:

PDF, 1.05 MB

english, 2010

20

First Exon Length Controls Active Chromatin Signatures and Transcription

Nicole I. Bieberstein, Fernando Carrillo Oesterreich, Korinna Straube, Karla M. Neugebauer

Journal:

Year:

2012

Language:

english

File:

PDF, 1.95 MB

english, 2012

21

Cajal bodies: where form meets function

Machyna, Martin, Heyn, Patricia, Neugebauer, Karla M.

Journal:

Wiley Interdisciplinary Reviews: RNA

Year:

2013

Language:

english

File:

PDF, 435 KB

english, 2013

22

Differential responses of L5 and rat primary muscle cells to factors in rat brain extract

Karla Neugebauer, Miriam M. Salpeter, Thomas R. Podleski

Journal:

Year:

1985

Language:

english

File:

PDF, 2.75 MB

english, 1985

23

How cells get the message: dynamic assembly and function of mRNA–protein complexes

Müller-McNicoll, Michaela, Neugebauer, Karla M.

Journal:

Nature Reviews Genetics

Year:

2013

Language:

english

File:

PDF, 1.03 MB

english, 2013

24

N-cadherin and integrins: Two receptor systems that mediate neuronal process outgrowth on astrocyte surfaces

Tomaselli, Kevin J., Neugebauer, Karla M., Bixby, John L., Lilien, Jack, Reichard, Louis F.

Journal:

Year:

1988

Language:

english

File:

PDF, 4.22 MB

english, 1988

25

Good cap/bad cap: how the cap-binding complex determines RNA fate

Müller-McNicoll, Michaela, Neugebauer, Karla M

Journal:

Nature Structural and Molecular Biology

Year:

2014

Language:

english

File:

PDF, 1.10 MB

english, 2014

26

Analytical Records.

Tomaselli, Kevin J., Neugebauer, Karla M.

Journal:

Year:

1880

Language:

english

File:

PDF, 347 KB

english, 1880

27

2001 interactions? An extracellular space odyssey

Tomaselli, Kevin J., Neugebauer, Karla M.

Journal:

Current Opinion in Neurobiology

Year:

1991

Language:

english

File:

PDF, 817 KB

english, 1991

28

The Earliest Transcribed Zygotic Genes Are Short, Newly Evolved, and Different across Species

Heyn, Patricia, Kircher, Martin, Dahl, Andreas, Kelso, Janet, Tomancak, Pavel, Kalinka, Alex T., Neugebauer, Karla M.

Journal:

Year:

2014

Language:

english

File:

PDF, 796 KB

english, 2014

29

A systematic RNAi synthetic interaction screen reveals a link between p53 and snoRNP assembly

Krastev, Dragomir B., Slabicki, Mikolaj, Paszkowski-Rogacz, Maciej, Hubner, Nina C., Junqueira, Magno, Shevchenko, Andrej, Mann, Matthias, Neugebauer, Karla M., Buchholz, Frank

Journal:

Nature Cell Biology

Year:

2011

Language:

english

File:

PDF, 3.09 MB

english, 2011

30

Formation and Regeneration of Nerve Connections.by Sansar C. Sharma; James W. Fawcett

Review by: Karla Neugebauer

Journal:

Quarterly Review of Biology

Year:

1995

Language:

english

File:

PDF, 349 KB

english, 1995

31

Embryonic Neural Retinal Cell Response to Extracellular Matrix Proteins: Developmental Changes and Effects of the Cell Substratum Attachment Antibody (CSAT)

Deborah E. Hall, Karla M. Neugebauer and Louis F. Reichardt

Journal:

The Journal of Cell Biology

Year:

1987

File:

PDF, 6.25 MB

1987

32

N-Cadherin, NCAM, and Integrins Promote Retinal Neurite Outgrowth on Astrocytes in Vitro

Karla M. Neugebauer, Kevin J. Tomaselli, Jack Lilien and Louis F. Reichardt

Journal:

The Journal of Cell Biology

Year:

1988

Language:

english

File:

PDF, 3.15 MB

english, 1988

33

A Conserved Epitope on a Subset of SR Proteins Defines a Larger Family of Pre-mRNA Splicing Factors

Karla M. Neugebauer, John A. Stolk and Mark B. Roth

Journal:

The Journal of Cell Biology

Year:

1995

Language:

english

File:

PDF, 2.82 MB

english, 1995

34

Targeting of U4/U6 Small Nuclear RNP Assembly Factor SART3/p110 to Cajal Bodies

David Stanĕk, Stephen D. Rader, Mirko Klingauf and Karla M. Neugebauer

Journal:

The Journal of Cell Biology

Year:

2003

Language:

english

File:

PDF, 2.25 MB

english, 2003

35

Detection of snRNP Assembly Intermediates in Cajal Bodies by Fluorescence Resonance Energy Transfer

David Stanĕk and Karla M. Neugebauer

Journal:

The Journal of Cell Biology

Year:

2004

Language:

english

File:

PDF, 3.10 MB

english, 2004

36

The Coilin Interactome Identifies Hundreds of Small Noncoding RNAs that Traffic through Cajal Bodies

Machyna, Martin, Kehr, Stephanie, Straube, Korinna, Kappei, Dennis, Buchholz, Frank, Butter, Falk, Ule, Jernej, Hertel, Jana, Stadler, Peter F., Neugebauer, Karla M.

Journal:

Year:

2014

Language:

english

File:

PDF, 2.51 MB

english, 2014

37

mRNA: a complex(ed) life

Michaela Müller,Karla M Neugebauer,Christian Eckmann

Journal:

Year:

2010

Language:

english

File:

PDF, 241 KB

english, 2010

38

Introns and gene expression: Cellular constraints, transcriptional regulation, and evolutionary consequences

Heyn, Patricia, Kalinka, Alex T., Tomancak, Pavel, Neugebauer, Karla M.

Journal:

Year:

2015

Language:

english

File:

PDF, 364 KB

english, 2015

39

Quantification of co-transcriptional splicing from RNA-Seq data

Herzel, Lydia, Neugebauer, Karla M.

Journal:

Year:

2015

Language:

english

File:

PDF, 5.43 MB

english, 2015

40

Coilin: The first 25 years

Machyna, Martin, Neugebauer, Karla M, Staněk, David

Journal:

Year:

2015

Language:

english

File:

PDF, 1.69 MB

english, 2015

41

Counting on co-transcriptional splicing

Brugiolo, Mattia, Herzel, Lydia, Neugebauer, Karla M

Journal:

F1000Prime Reports

Year:

2013

Language:

english

File:

PDF, 666 KB

english, 2013

42

The In Vivo Kinetics of RNA Polymerase II Elongation during Co-Transcriptional Splicing

Brody, Yehuda, Neufeld, Noa, Bieberstein, Nicole, Causse, Sebastien Z., Böhnlein, Eva-Maria, Neugebauer, Karla M., Darzacq, Xavier, Shav-Tal, Yaron, Misteli, Tom

Journal:

Year:

2011

Language:

english

File:

PDF, 2.35 MB

english, 2011

43

Extragenic Accumulation of RNA Polymerase II Enhances Transcription by RNA Polymerase III

Listerman, Imke, Bledau, Anita S., Grishina, Inna, Neugebauer, Karla M.

Journal:

Year:

2007

Language:

english

File:

PDF, 729 KB

english, 2007

44

Dynamic control of Cajal body number during zebrafish embryogenesis

Strzelecka, Magdalena, Oates, Andrew C., Neugebauer, Karla

Journal:

Nucleus (Landes Bioscience)

Year:

2010

Language:

english

File:

PDF, 3.96 MB

english, 2010

45

Chromatin organization, structure and dynamics

Raška, Ivan, Gruenbaum, Yosef, Herrmann, Harald, Neugebauer, Karla

Journal:

Nucleus (Landes Bioscience)

Year:

2011

Language:

english

File:

PDF, 326 KB

english, 2011

46

Binding properties and dynamic localization of an alternative isoform of the cap-binding complex subunit CBP20

Pabis, Marta, Neufeld, Noa, Shav-Tal, Yaron, Neugebauer, Karla

Journal:

Nucleus (Landes Bioscience)

Year:

2010

Language:

english

File:

PDF, 2.06 MB

english, 2010

47

In vivo Kinetics of Cajal Body Components

Miroslav Dundr, Michael D. Hebert, Tatiana S. Karpova, David Stanek, Hongzi Xu, Karl B. Shpargel, U. Thomas Meier, Karla M. Neugebauer, A. Gregory Matera and Tom Misteli

Journal:

The Journal of Cell Biology

Year:

2004

Language:

english

File:

PDF, 3.62 MB

english, 2004

48

SR proteins are NXF1 adaptors that link alternative RNA processing to mRNA export

Müller-McNicoll, Michaela, Botti, Valentina, de Jesus Domingues, Antonio M., Brandl, Holger, Schwich, Oliver D., Steiner, Michaela C., Curk, Tomaz, Poser, Ina, Zarnack, Kathi, Neugebauer, Karla M.

Journal:

Genes & Development

Year:

2016

Language:

english

File:

PDF, 1.02 MB

english, 2016

49

Splicing of Nascent RNA Coincides with Intron Exit from RNA Polymerase II

Carrillo Oesterreich, Fernando, Herzel, Lydia, Straube, Korinna, Hujer, Katja, Howard, Jonathon, Neugebauer, Karla M.

Journal:

Year:

2016

Language:

english

File:

PDF, 1.07 MB

english, 2016

50

The differential interaction of snRNPs with pre-mRNA reveals splicing kinetics in living cells

Martina Huranová, Ivan Ivani, Aleš Benda, Ina Poser, Yehuda Brody, Martin Hof, Yaron Shav-Tal, Karla M. Neugebauer and David Staněk

Journal:

The Journal of Cell Biology

Year:

2010

Language:

english

File:

PDF, 2.54 MB

english, 2010